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Metabolon Inc metabolomic profiling analysis
<t>Metabolomics</t> analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Pearson’s correlation coefficients among samples. The greater the correlation between samples, the larger the value and the redder the color. (B) PLS-DA score plots in duck. Each point represents a sample, and the degree of dispersion of the two colors represents the distribution trend of the two groups on the PC1 and PC2 axes. (C) Volcano maps of SDMs in BME15 vs. PME15. (D) Volcano maps of SDMs in BME21 vs. PME21. (E) Volcano maps of SDMs in BME27 vs. PME27. (F) Top 20 KEGG pathways of SDMs in BME15 vs. PME15. (G) Top 20 KEGG pathways of SDMs in BME21 vs. PME21. (H) Top 20 KEGG pathways of SDMs in BME27 vs. PME27.
Metabolomic Profiling Analysis, supplied by Metabolon Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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1) Product Images from "Integrative metabolome and transcriptome analyses provide insights into skeletal muscle development of two duck breeds during embryonic stage"

Article Title: Integrative metabolome and transcriptome analyses provide insights into skeletal muscle development of two duck breeds during embryonic stage

Journal: Poultry Science

doi: 10.1016/j.psj.2026.106444

Metabolomics analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Pearson’s correlation coefficients among samples. The greater the correlation between samples, the larger the value and the redder the color. (B) PLS-DA score plots in duck. Each point represents a sample, and the degree of dispersion of the two colors represents the distribution trend of the two groups on the PC1 and PC2 axes. (C) Volcano maps of SDMs in BME15 vs. PME15. (D) Volcano maps of SDMs in BME21 vs. PME21. (E) Volcano maps of SDMs in BME27 vs. PME27. (F) Top 20 KEGG pathways of SDMs in BME15 vs. PME15. (G) Top 20 KEGG pathways of SDMs in BME21 vs. PME21. (H) Top 20 KEGG pathways of SDMs in BME27 vs. PME27.
Figure Legend Snippet: Metabolomics analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Pearson’s correlation coefficients among samples. The greater the correlation between samples, the larger the value and the redder the color. (B) PLS-DA score plots in duck. Each point represents a sample, and the degree of dispersion of the two colors represents the distribution trend of the two groups on the PC1 and PC2 axes. (C) Volcano maps of SDMs in BME15 vs. PME15. (D) Volcano maps of SDMs in BME21 vs. PME21. (E) Volcano maps of SDMs in BME27 vs. PME27. (F) Top 20 KEGG pathways of SDMs in BME15 vs. PME15. (G) Top 20 KEGG pathways of SDMs in BME21 vs. PME21. (H) Top 20 KEGG pathways of SDMs in BME27 vs. PME27.

Techniques Used: Dispersion

Combined transcriptome and metabolomics analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Venn map of DEGs and SDMs in E15. (B) Venn map of DEGs and SDMs in E21. (C) Venn map of DEGs and SDMs in E27. (D) Correlation analysis for KEGG of SDMs and DEGs in E15. (E) Correlation analysis for KEGG of SDMs and DEGs in E21. (F) Correlation analysis for KEGG of SDMs and DEGs in E27.
Figure Legend Snippet: Combined transcriptome and metabolomics analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Venn map of DEGs and SDMs in E15. (B) Venn map of DEGs and SDMs in E21. (C) Venn map of DEGs and SDMs in E27. (D) Correlation analysis for KEGG of SDMs and DEGs in E15. (E) Correlation analysis for KEGG of SDMs and DEGs in E21. (F) Correlation analysis for KEGG of SDMs and DEGs in E27.

Techniques Used:

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Article Title: Integrative metabolome and transcriptome analyses provide insights into skeletal muscle development of two duck breeds during embryonic stage
Article Snippet: .. Metabolomic profiling analysis was performed by Metabolon as previously described ( ). ..

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Article Snippet: .. Liver samples from LFD-fed WT and KO male mice were sent to Metabolon, Inc. (Durham, NC) for metabolomic profiling analysis as previously described (54). ..

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Chromatography:

Article Title: Unintended effects of transgenic rice revealed by transcriptome and metabolism.
Article Snippet: .. Metabolite Profiling The metabolomic profiling analysis was performed by Metabolon (Durham, NC, USA).43 The metabolomic platforms consisted of three independent platforms: ultrahigh performance liquid chromatography/tandem-mass spectrometry (UPLC/MS/MS2) optimized for basic species, UPLC/MS/MS2 optimized for acidic species, and gas chromatography/mass spectrometry (GC/ MS) for volatile species. ..

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Article Title: Integrative Analysis of Transcriptomics and Metabolomics to Reveal the Melanogenesis Pathway of Muscle and Related Meat Characters in Wuliangshan Black-Boned Chickens
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Article Title: Unique metabolite preferences of the drug transporters OAT1 and OAT3 analyzed by machine learning
Article Snippet: .. Metabolomic analysis, compound identification, quantification, data curation, and statistics for the Oat1KO Individual, unpooled serum samples obtained from adult male wildtype (WT; control) and Oat1KO mice were stored at −80 °C and shipped on dry-ice to Metabolon (Durham, NC) for preparation and metabolomic profiling analysis as described previously ( 28 , 63 ). .. In this analysis of the Oat1KO , a total of 731 metabolites of known identity were detected and identified utilizing a reference library of chemical standard entries using software developed at Metabolon, as described previously.

Article Title: Unique metabolite preferences of the drug transporters OAT1 and OAT3 analyzed by machine learning
Article Snippet: .. Individual, unpooled serum samples obtained from adult male wildtype (WT; control) and Oat1KO mice were stored at −80 °C and shipped on dry-ice to Metabolon (Durham, NC) for preparation and metabolomic profiling analysis as described previously ( 28 , 63 ). .. In this analysis of the Oat1KO , a total of 731 metabolites of known identity were detected and identified utilizing a reference library of chemical standard entries using software developed at Metabolon, as described previously.



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<t>Metabolomics</t> analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Pearson’s correlation coefficients among samples. The greater the correlation between samples, the larger the value and the redder the color. (B) PLS-DA score plots in duck. Each point represents a sample, and the degree of dispersion of the two colors represents the distribution trend of the two groups on the PC1 and PC2 axes. (C) Volcano maps of SDMs in BME15 vs. PME15. (D) Volcano maps of SDMs in BME21 vs. PME21. (E) Volcano maps of SDMs in BME27 vs. PME27. (F) Top 20 KEGG pathways of SDMs in BME15 vs. PME15. (G) Top 20 KEGG pathways of SDMs in BME21 vs. PME21. (H) Top 20 KEGG pathways of SDMs in BME27 vs. PME27.
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<t>Metabolomics</t> analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Pearson’s correlation coefficients among samples. The greater the correlation between samples, the larger the value and the redder the color. (B) PLS-DA score plots in duck. Each point represents a sample, and the degree of dispersion of the two colors represents the distribution trend of the two groups on the PC1 and PC2 axes. (C) Volcano maps of SDMs in BME15 vs. PME15. (D) Volcano maps of SDMs in BME21 vs. PME21. (E) Volcano maps of SDMs in BME27 vs. PME27. (F) Top 20 KEGG pathways of SDMs in BME15 vs. PME15. (G) Top 20 KEGG pathways of SDMs in BME21 vs. PME21. (H) Top 20 KEGG pathways of SDMs in BME27 vs. PME27.
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<t>Metabolomics</t> analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Pearson’s correlation coefficients among samples. The greater the correlation between samples, the larger the value and the redder the color. (B) PLS-DA score plots in duck. Each point represents a sample, and the degree of dispersion of the two colors represents the distribution trend of the two groups on the PC1 and PC2 axes. (C) Volcano maps of SDMs in BME15 vs. PME15. (D) Volcano maps of SDMs in BME21 vs. PME21. (E) Volcano maps of SDMs in BME27 vs. PME27. (F) Top 20 KEGG pathways of SDMs in BME15 vs. PME15. (G) Top 20 KEGG pathways of SDMs in BME21 vs. PME21. (H) Top 20 KEGG pathways of SDMs in BME27 vs. PME27.
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Metabolomics analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Pearson’s correlation coefficients among samples. The greater the correlation between samples, the larger the value and the redder the color. (B) PLS-DA score plots in duck. Each point represents a sample, and the degree of dispersion of the two colors represents the distribution trend of the two groups on the PC1 and PC2 axes. (C) Volcano maps of SDMs in BME15 vs. PME15. (D) Volcano maps of SDMs in BME21 vs. PME21. (E) Volcano maps of SDMs in BME27 vs. PME27. (F) Top 20 KEGG pathways of SDMs in BME15 vs. PME15. (G) Top 20 KEGG pathways of SDMs in BME21 vs. PME21. (H) Top 20 KEGG pathways of SDMs in BME27 vs. PME27.

Journal: Poultry Science

Article Title: Integrative metabolome and transcriptome analyses provide insights into skeletal muscle development of two duck breeds during embryonic stage

doi: 10.1016/j.psj.2026.106444

Figure Lengend Snippet: Metabolomics analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Pearson’s correlation coefficients among samples. The greater the correlation between samples, the larger the value and the redder the color. (B) PLS-DA score plots in duck. Each point represents a sample, and the degree of dispersion of the two colors represents the distribution trend of the two groups on the PC1 and PC2 axes. (C) Volcano maps of SDMs in BME15 vs. PME15. (D) Volcano maps of SDMs in BME21 vs. PME21. (E) Volcano maps of SDMs in BME27 vs. PME27. (F) Top 20 KEGG pathways of SDMs in BME15 vs. PME15. (G) Top 20 KEGG pathways of SDMs in BME21 vs. PME21. (H) Top 20 KEGG pathways of SDMs in BME27 vs. PME27.

Article Snippet: Metabolomic profiling analysis was performed by Metabolon as previously described ( ).

Techniques: Dispersion

Combined transcriptome and metabolomics analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Venn map of DEGs and SDMs in E15. (B) Venn map of DEGs and SDMs in E21. (C) Venn map of DEGs and SDMs in E27. (D) Correlation analysis for KEGG of SDMs and DEGs in E15. (E) Correlation analysis for KEGG of SDMs and DEGs in E21. (F) Correlation analysis for KEGG of SDMs and DEGs in E27.

Journal: Poultry Science

Article Title: Integrative metabolome and transcriptome analyses provide insights into skeletal muscle development of two duck breeds during embryonic stage

doi: 10.1016/j.psj.2026.106444

Figure Lengend Snippet: Combined transcriptome and metabolomics analysis of three embryonic stages in breast muscle of Yulin black duck and Pekin duck. (A) Venn map of DEGs and SDMs in E15. (B) Venn map of DEGs and SDMs in E21. (C) Venn map of DEGs and SDMs in E27. (D) Correlation analysis for KEGG of SDMs and DEGs in E15. (E) Correlation analysis for KEGG of SDMs and DEGs in E21. (F) Correlation analysis for KEGG of SDMs and DEGs in E27.

Article Snippet: Metabolomic profiling analysis was performed by Metabolon as previously described ( ).

Techniques:

Effect of short-term wheel running exercise on synovial fluid metabolites. Synovial fluid was collected from knees of male and female mice following 0, 1, 3, or 5 days of voluntary wheel running exercise and intra-articular injections, as described in Fig. . Samples were analyzed by Metabolon’s Global Metabolomic Profiling Analysis, which identified 202 biochemicals confirmed by authenticated library standards. Peak area data were normalized to extracted volume and then median scaled. ( A ) 2-way hierarchical clustering analysis was used to identify patterns in synovial fluid metabolite abundance across experimental groups. Heatmap color legend signifies standardized metabolite values calculated by subtracting the mean and dividing by the standard deviation. Columns represent mean values per experimental group, and rows represent individual metabolites. Note that 3- and 5-day exercise conditions clustered together in the third and fourth columns. Filled cells in right-hand column indicate metabolites significantly altered by exercise (Generalized Linear Model including exercise, sex, and treatment effects). Green rectangles designate clusters (C1 – C5) with distinct changes in metabolite abundance versus days of exercise. ( B ) Pie chart of relative percent of all detected metabolites categorized by Metabolon’s Metabolic Super Pathway assignment. Numbers in parentheses indicate absolute number of metabolites detected per category. ( C ) Pie charts of cluster-specific metabolite composition based on Metabolic Super Pathway assignments. Donut charts indicate the relative proportion of metabolites within a given cluster that were significantly altered by exercise, biological sex, or treatment ( p < 0.05). Line graphs of metabolites significantly altered by exercise, expressed as abundance fold-change relative to day 0 values (log2) and color coded according to Metabolic Super Pathway (Supplemental Table 7).

Journal: Scientific Reports

Article Title: Exercise induces dynamic changes in intra-articular metabolism and inflammation associated with remodeling of the infrapatellar fat pad in mice

doi: 10.1038/s41598-025-86726-0

Figure Lengend Snippet: Effect of short-term wheel running exercise on synovial fluid metabolites. Synovial fluid was collected from knees of male and female mice following 0, 1, 3, or 5 days of voluntary wheel running exercise and intra-articular injections, as described in Fig. . Samples were analyzed by Metabolon’s Global Metabolomic Profiling Analysis, which identified 202 biochemicals confirmed by authenticated library standards. Peak area data were normalized to extracted volume and then median scaled. ( A ) 2-way hierarchical clustering analysis was used to identify patterns in synovial fluid metabolite abundance across experimental groups. Heatmap color legend signifies standardized metabolite values calculated by subtracting the mean and dividing by the standard deviation. Columns represent mean values per experimental group, and rows represent individual metabolites. Note that 3- and 5-day exercise conditions clustered together in the third and fourth columns. Filled cells in right-hand column indicate metabolites significantly altered by exercise (Generalized Linear Model including exercise, sex, and treatment effects). Green rectangles designate clusters (C1 – C5) with distinct changes in metabolite abundance versus days of exercise. ( B ) Pie chart of relative percent of all detected metabolites categorized by Metabolon’s Metabolic Super Pathway assignment. Numbers in parentheses indicate absolute number of metabolites detected per category. ( C ) Pie charts of cluster-specific metabolite composition based on Metabolic Super Pathway assignments. Donut charts indicate the relative proportion of metabolites within a given cluster that were significantly altered by exercise, biological sex, or treatment ( p < 0.05). Line graphs of metabolites significantly altered by exercise, expressed as abundance fold-change relative to day 0 values (log2) and color coded according to Metabolic Super Pathway (Supplemental Table 7).

Article Snippet: Samples were analyzed by Metabolon’s Global Metabolomic Profiling Analysis, which identified 202 biochemicals confirmed by authenticated library standards.

Techniques: Standard Deviation